Reptile: Finds all repeats in proteins
REPository
Sequences may be in fasta, embl, genbank, SWISS-PROT, gcg, gcgdata, pir or raw format.
Fasta format looks like this:
>Example sequence 1
MAHKLERTIYDCFFGH...
>Example sequence 2
MGGARGHRNAAGLALLER...
...
How is the p-value calculated?
Links:
RADAR
REPuter
REPRO
REP
TRIPS
Internal repeat finder
Protein Sequence(s):
Upload seqence file:
Maximal word size:
e-value threshhold:
Job name:
References:
Reptile: Finds all repeats in proteins,
Nick Fankhauser
and
Pascal Maeser
, Publication submitted
